Package: tigger 1.1.1.999

tigger: Infers Novel Immunoglobulin Alleles from Sequencing Data

Infers the V genotype of an individual from immunoglobulin (Ig) repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of any novel alleles. This information is then used to correct existing V allele calls from among the sample sequences. Citations: Gadala-Maria, et al (2015) <doi:10.1073/pnas.1417683112>, Gadala-Maria, et al (2019) <doi:10.3389/fimmu.2019.00129>.

Authors:Daniel Gadala-Maria [aut], Susanna Marquez [aut, cre], Moriah Cohen [aut], Jason Vander Heiden [aut], Gur Yaari [aut], Steven Kleinstein [aut, cph]

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NEWS

# Install 'tigger' in R:

install.packages('tigger', repos = c('https://ssnn-airr.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://bitbucket.org/kleinstein/tigger

Datasets:

On CRAN:

20 exports 1.20 score 102 dependencies 1 dependents 95 scripts 416 downloads

Last updated 1 months agofrom:87d69a0b37. Checks:OK: 1 WARNING: 6. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Sep 02 2024
R-4.5-win	WARNING	Sep 02 2024
R-4.5-linux	WARNING	Sep 02 2024
R-4.4-win	WARNING	Sep 02 2024
R-4.4-mac	WARNING	Sep 02 2024
R-4.3-win	WARNING	Sep 02 2024
R-4.3-mac	WARNING	Sep 02 2024